miRBase entry: cfa-mir-23b

Accession

MI0008008

Description

Canis familiaris cfa-mir-23b precursor miRNA

Sequence

guuccuggcaugcugauuugugacuuaagauuaaaAUCACAUUGCCAGGGAUUA
((((((((((((.((((((..............)))))))).))))))))))..

Structure

--          -  c      gugacu 
  guuccuggca ug ugauuu      u
  |||||||||| || ||||||       
  UAGGGACCGU AC ACUAaa      a
AU          U  -      auuaga

Annotation confidence Not enough data

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Genome context

chr1: 71678353-71678406 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from cfa-mir-23b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Accession	MIMAT0006612
Description	Canis familiaris cfa-miR-23b mature miRNA
Sequence	36 - AUCACAUUGCCAGGGAUUA - 54
Evidence	experimental Illumina [1]

PubMed ID: 18392026
Discovering microRNAs from deep sequencing data using miRDeep
"Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
"Nat Biotechnol (2008) 26:407-415