Stem-loop cfa-mir-185

Accession

MI0008065

Description

Canis lupus familiaris cfa-mir-185 precursor miRNA

Literature search

6 open access papers mention cfa-mir-185
(8 sentences)

Sequence

241412 reads, 288.0 reads per million, 82 experiments

UGGAGAGAAAGGCAGUUCCUGAugguccccucccCAGGGGCUGGCUUUCCUCUGGU
.((((.(((((.(((((((((..((......)).))))))))).)))))))))...

Structure

--U    A     G         Au  uc 
   GGAG GAAAG CAGUUCCUG  gg  c
   |||| ||||| |||||||||  ||   
   UCUC CUUUC GUCGGGGAC  cc  c
UGG    -     G         -c  uc 

Annotation confidence High

Genome context

26: 30699896-30699951 [-]

Mature cfa-miR-185-5p

• Accession: MIMAT0006660
• Description: Canis lupus familiaris cfa-miR-185-5p mature miRNA
• Sequence: 1 - UGGAGAGAAAGGCAGUUCCUGA - 22
• Evidence: experimental ; Illumina [1]

Mature cfa-miR-185-3p

• Accession: MIMAT0051776
• Description: Canis lupus familiaris cfa-miR-185-3p mature miRNA
• Sequence: 35 - CAGGGGCUGGCUUUCCUCUGGU - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415