Stem-loop cfa-mir-32

Accession

MI0007992

Description

Canis lupus familiaris cfa-mir-32 precursor miRNA

Literature search

1 open access papers mention cfa-mir-32
(1 sentences)

Sequence

86457 reads, 132.0 reads per million, 79 experiments

UAUUGCACAUUACUAAGUUGCAuguugucacggccucaaugCAAUUUAGUGUGUGUGAUAUU
((((((((((.(((((((((((((..((....))..).))))))))))))))))))))))..

Structure

--          U            - uu  c 
  UAUUGCACAU ACUAAGUUGCAu g  gu a
  |||||||||| |||||||||||| |  ||  
  AUAGUGUGUG UGAUUUAACgua c  cg c
UU          -            a uc  g 

Annotation confidence High

Genome context

11: 65330988-65331049 [-]

Mature cfa-miR-32-5p

• Accession: MIMAT0006597
• Description: Canis lupus familiaris cfa-miR-32-5p mature miRNA
• Sequence: 1 - UAUUGCACAUUACUAAGUUGCA - 22
• Evidence: experimental ; Illumina [1]

Mature cfa-miR-32-3p

• Accession: MIMAT0051706
• Description: Canis lupus familiaris cfa-miR-32-3p mature miRNA
• Sequence: 42 - CAAUUUAGUGUGUGUGAUAUU - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415