Stem-loop cfa-mir-26a-1

Accession

MI0008058

Description

Canis lupus familiaris cfa-mir-26a-1 precursor miRNA

Sequence

31091695 reads, 51129.0 reads per million, 82 experiments

UUCAAGUAAUCCAGGAUAGGCUgugcaggucccaaugggCCUAUUCUUGGUUACUUGCACG
..(((((((((.((((((((((...............)))))))))).)))))))))....

Structure

--UU         C          gugcag 
    CAAGUAAUC AGGAUAGGCU      g
    ||||||||| ||||||||||      u
    GUUCAUUGG UCUUAUCCgg      c
GCAC         U          guaacc 

Annotation confidence High

Genome context

23: 8036042-8036102 [+]

Mature cfa-miR-26a-5p

• Accession: MIMAT0006595
• Description: Canis lupus familiaris cfa-miR-26a-5p mature miRNA
• Sequence: 1 - UUCAAGUAAUCCAGGAUAGGCU - 22
• Evidence: experimental ; Illumina [1]

Mature cfa-miR-26a-1-3p

• Accession: MIMAT0051704
• Description: Canis lupus familiaris cfa-miR-26a-1-3p mature miRNA
• Sequence: 40 - CCUAUUCUUGGUUACUUGCACG - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415