Stem-loop cfa-mir-376a-2

Accession

MI0008142

Description

Canis lupus familiaris cfa-mir-376a-2 precursor miRNA

Literature search

1 open access papers mention cfa-mir-376a-2
(2 sentences)

Sequence

3002 reads, 9.0 reads per million, 64 experiments

GUAGAUUUUCCUUCUAUGAUUAcguguuugaugguuaAUCAUAGAGGAAAAUCCACGU
((.(((((((((.((((((((((((.....)))..)))))))))))))))))).))..

Structure

--  A         U         --   g 
  GU GAUUUUCCU CUAUGAUUA  cgu u
  || ||||||||| |||||||||  ||| u
  CA CUAAAAGGA GAUACUAau  gua u
UG  C         -         ug   g 

Annotation confidence High

Genome context

8: 69552209-69552266 [+]

Clustered miRNAs

15 other miRNAs are < 10 kb from cfa-mir-376a-2

Mature cfa-miR-376a-2-5p

• Accession: MIMAT0051841
• Description: Canis lupus familiaris cfa-miR-376a-2-5p mature miRNA
• Sequence: 1 - GUAGAUUUUCCUUCUAUGAUUA - 22
• Evidence: experimental ; Illumina [1]

Mature cfa-miR-376a-3p

• Accession: MIMAT0006722
• Description: Canis lupus familiaris cfa-miR-376a-3p mature miRNA
• Sequence: 38 - AUCAUAGAGGAAAAUCCACGU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415