Stem-loop cfa-mir-196b

Accession

MI0008016

Description

Canis familiaris cfa-mir-196b precursor miRNA

Gene family

MIPF0000031; mir-196

Sequence

UAGGUAGUUUCCUGUUGUUGGGAuccaccuuucucucgacagcacgacacugccuuca
.(((((((.((.(((((((((((..........))))))))))).)).)))))))...

Structure

--U       U  C           ucca 
   AGGUAGU UC UGUUGUUGGGA    c
   ||||||| || |||||||||||     
   uccguca ag acgacagcucu    c
acu       c  c           cuuu 

Annotation confidence Not enough data

Genome context

chr14: 40344005-40344062 [-]

Mature cfa-miR-196b

• Accession: MIMAT0006620
• Description: Canis familiaris cfa-miR-196b mature miRNA
• Sequence: 1 - UAGGUAGUUUCCUGUUGUUGGGA - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415