Stem-loop cfa-mir-1840

Accession

MI0008089

Description

Canis familiaris cfa-mir-1840 precursor miRNA

Sequence

uuagggcgcgucacgugacgggcucgucgcuccgccgUCACGUGACGGGCCUCGGCG
...((((.(((((((((((((((.....))....))))))))))))).)))).....

Structure

--uua    g             ----  u 
     gggc cgucacgugacgg    gc c
     |||| |||||||||||||    || g
     UCCG GCAGUGCACUgcc    cg u
GCGGC    G             gccu  c 

Annotation confidence Not enough data

Genome context

chr37: 25734793-25734849 [+]

Mature cfa-miR-1840

• Accession: MIMAT0006679
• Description: Canis familiaris cfa-miR-1840 mature miRNA
• Sequence: 38 - UCACGUGACGGGCCUCGGCG - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415