Stem-loop cfa-mir-206

Accession

MI0008002

Description

Canis lupus familiaris cfa-mir-206 precursor miRNA

Literature search

14 open access papers mention cfa-mir-206
(162 sentences)

Sequence

326115 reads, 440.0 reads per million, 60 experiments

acaugcuucuuuauauccccauacggauuacguugcuaUGGAAUGUAAGGAAGUGUGUGG
((((((((((((((((..(((((.(.(......).)))))).))))))))))))))))..

Structure

--                cc     c g uu 
  acaugcuucuuuauau  ccaua g a  a
  ||||||||||||||||  ||||| | |   
  UGUGUGAAGGAAUGUA  GGUau c u  c
GG                -A     - g ug 

Annotation confidence Not enough data

Genome context

12: 20304504-20304563 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cfa-mir-206

Mature cfa-miR-206-3p

• Accession: MIMAT0006606
• Description: Canis lupus familiaris cfa-miR-206-3p mature miRNA
• Sequence: 39 - UGGAAUGUAAGGAAGUGUGUGG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415