Stem-loop cfa-mir-363

Accession

MI0008176

Description

Canis lupus familiaris cfa-mir-363 precursor miRNA

Literature search

2 open access papers mention cfa-mir-363
(2 sentences)

Sequence

1652922 reads, 1063.0 reads per million, 81 experiments

uCGGGUGGAUCACGAUGCAAUUUUgaugaguauaauaggagaaaAAUUGCACGGUAUCCAUCUGUAA
.(((((((((..((.(((((((((..................)))))))))))..)))))))))...

Structure

--u         CA  A         gaugagua 
   CGGGUGGAU  CG UGCAAUUUU        u
   |||||||||  || |||||||||         
   GUCUACCUA  GC ACGUUAAaa        a
AAU         UG  -         agaggaua 

Annotation confidence High

Genome context

X: 106755413-106755479 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from cfa-mir-363

Mature cfa-miR-363-5p

• Accession: MIMAT0051870
• Description: Canis lupus familiaris cfa-miR-363-5p mature miRNA
• Sequence: 2 - CGGGUGGAUCACGAUGCAAUUUU - 24
• Evidence: experimental ; Illumina [1]

Mature cfa-miR-363-3p

• Accession: MIMAT0006750
• Description: Canis lupus familiaris cfa-miR-363-3p mature miRNA
• Sequence: 45 - AAUUGCACGGUAUCCAUCUGUAA - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415