Stem-loop cfa-mir-664

Accession

MI0008090

Description

Canis lupus familiaris cfa-mir-664 precursor miRNA

Sequence

10699 reads, 11.0 reads per million, 77 experiments

UGGGCUAGGAAAAAUGAUUGGAuaaaaaauauuauucUAUUCAUUUAUCUCCCAGCCUACA
((((((.(((.((((((.((((.............)))).))))))...))).))))))..

Structure

--      A   --A      U    uaaaa 
  UGGGCU GGA   AAAUGA UGGA     a
  |||||| |||   |||||| ||||     a
  AUCCGA CCU   UUUACU AUcu     u
AC      C   CUA      U    uauua 

Annotation confidence High

Genome context

38: 15012459-15012519 [-]

Mature cfa-miR-664-5p

• Accession: MIMAT0006680
• Description: Canis lupus familiaris cfa-miR-664-5p mature miRNA
• Sequence: 1 - UGGGCUAGGAAAAAUGAUUGGA - 22
• Evidence: experimental ; Illumina [1]

Mature cfa-miR-664-3p

• Accession: MIMAT0051800
• Description: Canis lupus familiaris cfa-miR-664-3p mature miRNA
• Sequence: 38 - UAUUCAUUUAUCUCCCAGCCUACA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415