Stem-loop cfa-mir-369

Accession

MI0008148

Description

Canis lupus familiaris cfa-mir-369 precursor miRNA

Literature search

2 open access papers mention cfa-mir-369
(3 sentences)

Sequence

248 reads, 6.0 reads per million, 37 experiments

AGUUCGACCGUGUUAUAUUCGcuuuauugacuucgAAUAAUACAUGGUUGGUCUUU
((.((((((((((..((((((............))))))..)))))))))).))..

Structure

--  U          UA      cuuua 
  AG UCGACCGUGU  UAUUCG     u
  || ||||||||||  ||||||      
  UC GGUUGGUACA  AUAAgc     u
UU  U          UA      uucag 

Annotation confidence High

Genome context

8: 69575742-69575797 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from cfa-mir-369

Mature cfa-miR-369-5p

• Accession: MIMAT0051848
• Description: Canis lupus familiaris cfa-miR-369-5p mature miRNA
• Sequence: 1 - AGUUCGACCGUGUUAUAUUCG - 21
• Evidence: experimental ; Illumina [1]

Mature cfa-miR-369-3p

• Accession: MIMAT0006727
• Description: Canis lupus familiaris cfa-miR-369-3p mature miRNA
• Sequence: 36 - AAUAAUACAUGGUUGGUCUUU - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415