Stem-loop cfa-mir-486

Accession

MI0008027

Description

Canis familiaris cfa-mir-486 precursor miRNA

Sequence

UCCUGUACUGAGCUGCCCCGAgcugagcgcagugaauggccUCGGGGCAGCUCAGUACAGGAUc
((((((((((((((((((((((....((.((.....))))))))))))))))))))))))))..

Structure

--                      cuga  g  g 
  UCCUGUACUGAGCUGCCCCGAg    gc ca u
  ||||||||||||||||||||||    || || g
  AGGACAUGACUCGACGGGGCUc    cg gu a
cU                      ----  -  a 

Annotation confidence Not enough data

Genome context

chr16: 23958963-23959026 [-]

Mature cfa-miR-486

• Accession: MIMAT0011132
• Description: Canis familiaris cfa-miR-486 mature miRNA
• Sequence: 1 - UCCUGUACUGAGCUGCCCCGA - 21
• Evidence: experimental ; Illumina [1-2]

Mature cfa-miR-486-3p

• Accession: MIMAT0032036
• Description: Canis familiaris cfa-miR-486-3p mature miRNA
• Sequence: 42 - UCGGGGCAGCUCAGUACAGGAU - 63
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415


2. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545