Stem-loop cfa-mir-151

Accession

MI0008011

Description

Canis lupus familiaris cfa-mir-151 precursor miRNA

Literature search

5 open access papers mention cfa-mir-151
(12 sentences)

Sequence

5054873 reads, 7571.0 reads per million, 82 experiments

UCGAGGAGCUCACAGUCUAGUAugucucagcccuaCUAGACUGAGGCUCCUUGAGG
((((((((((..((((((((((.((....))..)))))))))).))))))))))..

Structure

--          CA          -u  c 
  UCGAGGAGCU  CAGUCUAGUA  gu u
  ||||||||||  ||||||||||  ||  
  AGUUCCUCGG  GUCAGAUCau  cg c
GG          -A          cc  a 

Annotation confidence High

Genome context

13: 35737989-35738044 [-]

Mature cfa-miR-151-5p

• Accession: MIMAT0006615
• Description: Canis lupus familiaris cfa-miR-151-5p mature miRNA
• Sequence: 1 - UCGAGGAGCUCACAGUCUAGUA - 22
• Evidence: experimental ; Illumina [1]

Mature cfa-miR-151-3p

• Accession: MIMAT0051724
• Description: Canis lupus familiaris cfa-miR-151-3p mature miRNA
• Sequence: 36 - CUAGACUGAGGCUCCUUGAGG - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415