Stem-loop cfa-mir-342

Accession

MI0008128

Description

Canis familiaris cfa-mir-342 precursor miRNA

Sequence

gggugcuaucugugauugagggacauggcaaauagaauugUCUCACACAGAAAUCGCACCCGU
((((((..((((((.....((((((...(.....)...)))))).))))))....))))))..

Structure

--      --ua      auuga      ugg a 
  gggugc    ucugug     gggaca   c a
  ||||||    ||||||     ||||||   | a
  CCCACG    AGACAC     CUCUgu   g u
UG      CUAA      ----A      uaa a 

Annotation confidence Not enough data

Genome context

chr8: 68424656-68424718 [+]

Mature cfa-miR-342

• Accession: MIMAT0006709
• Description: Canis familiaris cfa-miR-342 mature miRNA
• Sequence: 41 - UCUCACACAGAAAUCGCACCCGU - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415