Stem-loop cfa-mir-350

Accession

MI0008120

Description

Canis lupus familiaris cfa-mir-350 precursor miRNA

Literature search

1 open access papers mention cfa-mir-350
(4 sentences)

Sequence

19971 reads, 29.0 reads per million, 78 experiments

agugcacgcgcuuugggacagugaagaaaauaaugUUCACAAAGCCCAUACACUUUU
((((...(.(((((((((((.............))))).)))))).)...))))...

Structure

---    cac c      -     gugaa 
   agug   g gcuuug ggaca     g
   ||||   | |||||| |||||     a
   UCAC   C CGAAAC CUUgu     a
UUU    AUA C      A     aauaa 

Annotation confidence Not enough data

Genome context

7: 34141596-34141652 [-]

Mature cfa-miR-350-3p

• Accession: MIMAT0006704
• Description: Canis lupus familiaris cfa-miR-350-3p mature miRNA
• Sequence: 36 - UUCACAAAGCCCAUACACUUUU - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415