miRBase entry: cfa-mir-495

Stem-loop cfa-mir-495

Accession

MI0008140

Description

Canis familiaris cfa-mir-495 precursor miRNA

Sequence

gaaguugcccguguuauuuucgcuugauacgugccgAAACAAACAUGGUGCACUUCUU
(((((.(((((((((..((((((.........).)))))..))))))).)))))))..

Structure

--     u  -       au     - uug 
  gaagu gc ccguguu  uuucg c   a
  ||||| || |||||||  ||||| |   u
  CUUCA CG GGUACAA  AAAgc g   a
UU     -  U       AC     c ugc

Annotation confidence Not enough data

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Genome context

chr8: 69265169-69265226 [+]

Clustered miRNAs

17 other miRNAs are < 10 kb from cfa-mir-495

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cfa-miR-495

Accession	MIMAT0006721
Description	Canis familiaris cfa-miR-495 mature miRNA
Sequence	37 - AAACAAACAUGGUGCACUUCUU - 58
Evidence	experimental Illumina [1]

References

PubMed ID: 18392026
Discovering microRNAs from deep sequencing data using miRDeep
"Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
"Nat Biotechnol (2008) 26:407-415