Stem-loop cfa-mir-103-1

Accession

MI0008098

Description

Canis lupus familiaris cfa-mir-103-1 precursor miRNA

Sequence

2633991 reads, 4265.0 reads per million, 82 experiments

ucGGCUUCUUUACAGUGCUGCCUUGuugcauauggaucaAGCAGCAUUGUACAGGGCUAUGA
..((((.((.(((((((((((.(((.(.(....).).)))))))))))))).))))))....

Structure

--uc    U  U           C   u g a 
    GGCU CU UACAGUGCUGC UUG u c u
    |||| || ||||||||||| ||| | |  
    UCGG GA AUGUUACGACG Aac a g a
AGUA    -  C           -   u g u 

Annotation confidence High

Genome context

4: 43604602-43604663 [+]

Mature cfa-miR-103-1-5p

• Accession: MIMAT0051806
• Description: Canis lupus familiaris cfa-miR-103-1-5p mature miRNA
• Sequence: 3 - GGCUUCUUUACAGUGCUGCCUUG - 25
• Evidence: not_experimental

Mature cfa-miR-103-3p

• Accession: MIMAT0006687
• Description: Canis lupus familiaris cfa-miR-103-3p mature miRNA
• Sequence: 40 - AGCAGCAUUGUACAGGGCUAUGA - 62
• Evidence: not_experimental

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415