Stem-loop cfa-mir-491

Accession

MI0007997

Description

Canis lupus familiaris cfa-mir-491 precursor miRNA

Literature search

2 open access papers mention cfa-mir-491
(2 sentences)

Sequence

715 reads, 2.0 reads per million, 68 experiments

gUGGGGAACCCUUCCAUGAGGAGUagaacacucCUUAUGCAAGAUUCCCUUCUA
(.((((((..(((.((((((((((.....)))))))))).))).)))))).)..

Structure

-- U      CC   C          a 
  g GGGGAA  CUU CAUGAGGAGU g
  | ||||||  ||| |||||||||| a
  C UCCCUU  GAA GUAUUCcuca a
AU U      -A   C          c 

Annotation confidence High

Genome context

11: 41242851-41242904 [+]

Mature cfa-miR-491-5p

• Accession: MIMAT0051710
• Description: Canis lupus familiaris cfa-miR-491-5p mature miRNA
• Sequence: 2 - UGGGGAACCCUUCCAUGAGGAGU - 24
• Evidence: experimental ; Illumina [1]

Mature cfa-miR-491-3p

• Accession: MIMAT0006601
• Description: Canis lupus familiaris cfa-miR-491-3p mature miRNA
• Sequence: 34 - CUUAUGCAAGAUUCCCUUCUA - 54
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415