Stem-loop cfa-mir-138b

Accession

MI0008047

Description

Canis familiaris cfa-mir-138b precursor miRNA

Sequence

AGCUGGUGUUGUGAAUCAUGCCGAcgagcagcgcauccucuuacccggcuauuucacgacaccaggguu
..(((((((((((((....((((..(((.((......)))))...))))...)))))))))))))....

Structure

--AG             UCAU    -Ac   c  cg 
    CUGGUGUUGUGAA    GCCG   gag ag  c
    |||||||||||||    ||||   ||| ||   
    gaccacagcacuu    cggc   uuc uc  a
uugg             -uau    cca   -  cu 

Annotation confidence Not enough data

Genome context

chr2: 59454083-59454151 [-]

Mature cfa-miR-138b

• Accession: MIMAT0006646
• Description: Canis familiaris cfa-miR-138b mature miRNA
• Sequence: 1 - AGCUGGUGUUGUGAAUCAUGCCGA - 24
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415