Stem-loop cfa-mir-124-1

Accession

MI0008062

Description

Canis lupus familiaris cfa-mir-124-1 precursor miRNA

Sequence

412954 reads, 1235.0 reads per million, 74 experiments

GUGUUCACAGCGGACCUUGAUUuaaauguccauacaaUUAAGGCACGCGGUGAAUGCCA
((((((((.(((..((((((((.............))))))))..))).))))))))..

Structure

--        A   GA        uaaau 
  GUGUUCAC GCG  CCUUGAUU     g
  |||||||| |||  ||||||||     u
  CGUAAGUG CGC  GGAAUUaa     c
AC        G   AC        cauac 

Annotation confidence High

Genome context

25: 28342736-28342794 [+]

Mature cfa-miR-124-5p

• Accession: MIMAT0051773
• Description: Canis lupus familiaris cfa-miR-124-5p mature miRNA
• Sequence: 1 - GUGUUCACAGCGGACCUUGAUU - 22
• Evidence: experimental ; Illumina [1]

Mature cfa-miR-124-3p

• Accession: MIMAT0006657
• Description: Canis lupus familiaris cfa-miR-124-3p mature miRNA
• Sequence: 38 - UUAAGGCACGCGGUGAAUGCCA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415