Stem-loop cfa-mir-338

Accession

MI0008163

Description

Canis familiaris cfa-mir-338 precursor miRNA

Sequence

aacaauauccuggugcugagugaugacacaugcaacUCCAGCAUCAGUGAUUUUGUUGA
(((((.(((((((((((((((.............))).))))))))).))).)))))..

Structure

--     u   -         -   gauga 
  aacaa auc cuggugcug agu     c
  ||||| ||| ||||||||| |||     a
  UUGUU UAG GACUACGAC Uca     c
AG     U   U         C   acgua 

Annotation confidence Not enough data

Genome context

chr9: 918652-918710 [+]

Mature cfa-miR-338

• Accession: MIMAT0006739
• Description: Canis familiaris cfa-miR-338 mature miRNA
• Sequence: 37 - UCCAGCAUCAGUGAUUUUGUUGA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415