Stem-loop cfa-mir-1-2

Accession

MI0008118

Description

Canis familiaris cfa-mir-1-2 precursor miRNA

Sequence

cauacuucuuuauguacccauaugaacauacaaugcuaUGGAAUGUAAAGAAGUAUGUA
(((((((((((((((..(((((..(........)..))))).)))))))))))))))..

Structure

--               ac     ug aca 
  cauacuucuuuaugu  ccaua  a   u
  |||||||||||||||  |||||  |    
  GUAUGAAGAAAUGUA  GGUau  u   a
AU               -A     cg aac 

Annotation confidence Not enough data

Genome context

chr7: 66214380-66214438 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cfa-mir-1-2

Mature cfa-miR-1

• Accession: MIMAT0006656
• Description: Canis familiaris cfa-miR-1 mature miRNA
• Sequence: 39 - UGGAAUGUAAAGAAGUAUGUA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415