Stem-loop cfa-mir-129-2

Accession

MI0008030

Description

Canis lupus familiaris cfa-mir-129-2 precursor miRNA

Sequence

175753 reads, 427.0 reads per million, 81 experiments

CUUUUUGCGGUCUGGGCUUGCuguacauaacucgauagccggAAGCCCUUACCCCAAAAAGCA
(((((((.(((..(((((((((((.(.......))))))...))))))..))).)))))))..

Structure

--       C   CU      ---     a au 
  CUUUUUG GGU  GGGCUU   GCugu c  a
  ||||||| |||  ||||||   ||||| |  a
  GAAAAAC CCA  CCCGAA   cgaua g  c
AC       C   UU      ggc     - cu 

Annotation confidence High

Genome context

18: 26776334-26776396 [-]

Mature cfa-miR-129-5p

• Accession: MIMAT0006623
• Description: Canis lupus familiaris cfa-miR-129-5p mature miRNA
• Sequence: 1 - CUUUUUGCGGUCUGGGCUUGC - 21
• Evidence: experimental ; Illumina [1]

Mature cfa-miR-129-2-3p

• Accession: MIMAT0051733
• Description: Canis lupus familiaris cfa-miR-129-2-3p mature miRNA
• Sequence: 43 - AAGCCCUUACCCCAAAAAGCA - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415