Stem-loop cfa-mir-186

Accession

MI0008108

Description

Canis lupus familiaris cfa-mir-186 precursor miRNA

Literature search

3 open access papers mention cfa-mir-186
(3 sentences)

Sequence

3530415 reads, 5786.0 reads per million, 82 experiments

CAAAGAAUUCUCCUUUUGGGCUUucugauuuuauuuuaaGCCCAAAGGUGAAUUUUUUGGG
((((((((((.(((((.((((((..............))))))))))).))))))))))..

Structure

--          U     U      ucugau 
  CAAAGAAUUC CCUUU GGGCUU      u
  |||||||||| ||||| ||||||       
  GUUUUUUAAG GGAAA CCCGaa      u
GG          U     -      uuuuau 

Annotation confidence High

Genome context

6: 75472184-75472244 [+]

Mature cfa-miR-186-5p

• Accession: MIMAT0006694
• Description: Canis lupus familiaris cfa-miR-186-5p mature miRNA
• Sequence: 1 - CAAAGAAUUCUCCUUUUGGGCUU - 23
• Evidence: experimental ; Illumina [1]

Mature cfa-miR-186-3p

• Accession: MIMAT0051814
• Description: Canis lupus familiaris cfa-miR-186-3p mature miRNA
• Sequence: 40 - GCCCAAAGGUGAAUUUUUUGGG - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415