Stem-loop cfa-mir-1841

Accession

MI0008096

Description

Canis lupus familiaris cfa-mir-1841 precursor miRNA

Sequence

4398 reads, 9.0 reads per million, 72 experiments

AGAGGAAAGCUGGACGGCAAGCcugaagggaagaagguggCUCCGUCCUCUUUCCAAGCC
...((((((..((((((..((((...............)))))))))).)))))).....

Structure

--AGA      CU      CA    ugaagg 
     GGAAAG  GGACGG  AGCc      g
     ||||||  ||||||  ||||      a
     CCUUUC  CCUGCC  UCgg      a
CCGAA      -U      --    uggaag 

Annotation confidence High

Genome context

4: 8727104-8727163 [-]

Mature cfa-miR-1841-5p

• Accession: MIMAT0006686
• Description: Canis lupus familiaris cfa-miR-1841-5p mature miRNA
• Sequence: 1 - AGAGGAAAGCUGGACGGCAAGC - 22
• Evidence: experimental ; Illumina [1]

Mature cfa-miR-1841-3p

• Accession: MIMAT0051805
• Description: Canis lupus familiaris cfa-miR-1841-3p mature miRNA
• Sequence: 41 - CUCCGUCCUCUUUCCAAGCC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415