Stem-loop cfa-mir-101-1

Accession

MI0008107

Description

Canis lupus familiaris cfa-mir-101-1 precursor miRNA

Sequence

6396801 reads, 14369.0 reads per million, 82 experiments

aguuaucacagugcugaugcuguccauucuaaagGUACAGUACUGUGAUAACUGA
((((((((((((((((.((((............))))))))))))))))))))..

Structure

--                a    gucca 
  aguuaucacagugcug ugcu     u
  |||||||||||||||| ||||      
  UCAAUAGUGUCAUGAC AUGg     u
AG                -    aaauc 

Annotation confidence Not enough data

Genome context

5: 45367400-45367454 [+]

Mature cfa-miR-101-3p

• Accession: MIMAT0006600
• Description: Canis lupus familiaris cfa-miR-101-3p mature miRNA
• Sequence: 35 - GUACAGUACUGUGAUAACUGA - 55
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415