Stem-loop cel-mir-1833

Accession

MI0008203

Description

Caenorhabditis elegans cel-mir-1833 precursor miRNA

Sequence

11 reads, 0 reads per million, 7 experiments

acgcuuacuucgcaagccucgcgcguuuucuuuucaagagaaaaagcgugCGAGGCUUGCGAAAUAAGUGUGC
(((((((.(((((((((((((((((((((((((...)))))))..)))))))))))))))))).)))))))..

Structure

--       c                  --       u 
  acgcuua uucgcaagccucgcgcgu  uuucuuu  
  ||||||| ||||||||||||||||||  ||||||| c
  UGUGAAU AAGCGUUCGGAGCgugcg  aaagaga  
CG       A                  aa       a 

Annotation confidence Not enough data

Genome context

chrIV: 15012347-15012419 [-]

Mature cel-miR-1833

• Accession: MIMAT0006775
• Description: Caenorhabditis elegans cel-miR-1833 mature miRNA
• Sequence: 51 - CGAGGCUUGCGAAAUAAGUGUGC - 73
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415