Stem-loop cfa-mir-219-2

Accession

MI0008150

Description

Canis familiaris cfa-mir-219-2 precursor miRNA

Gene family

MIPF0000044; mir-219

Sequence

UGAUUGUCCAAACGCAAUUCUuguacgagucugcggccaaccgAGAAUUGUGGCUGGACAUCUGU
.(((.(((((..(((((((((((...(.(((...))))...)))))))))))..))))))))...

Structure

--U   U     AA           uac a   u 
   GAU GUCCA  CGCAAUUCUug   g guc  
   ||| |||||  |||||||||||   | ||| g
   CUA CAGGU  GUGUUAAGAgc   c cgg  
UGU   -     CG           caa -   c 

Annotation confidence Not enough data

Genome context

chr9: 55139107-55139171 [+]

Mature cfa-miR-219-5p

• Accession: MIMAT0006611
• Description: Canis familiaris cfa-miR-219-5p mature miRNA
• Sequence: 1 - UGAUUGUCCAAACGCAAUUCU - 21
• Evidence: experimental ; Illumina [1]

Mature cfa-miR-219-3p

• Accession: MIMAT0006729
• Description: Canis familiaris cfa-miR-219-3p mature miRNA
• Sequence: 44 - AGAAUUGUGGCUGGACAUCUGU - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415