Stem-loop cfa-mir-129-1

Accession

MI0008019

Description

Canis lupus familiaris cfa-mir-129-1 precursor miRNA

Sequence

166334 reads, 386.0 reads per million, 81 experiments

CUUUUUGCGGUCUGGGCUUGCuguuccucucaacaguagucaggAAGCCCUUACCCCAAAAAGUA
(((((((.(((..((((((.(((..(..((....))..).))).))))))..))).)))))))..

Structure

--       C   CU      G   uu cu  c 
  CUUUUUG GGU  GGGCUU Cug  c  cu a
  ||||||| |||  |||||| |||  |  ||  
  GAAAAAC CCA  CCCGAA gac  g  ga a
AU       C   UU      g   -u au  c 

Annotation confidence High

Genome context

14: 7932070-7932134 [-]

Mature cfa-miR-129-5p

• Accession: MIMAT0006623
• Description: Canis lupus familiaris cfa-miR-129-5p mature miRNA
• Sequence: 1 - CUUUUUGCGGUCUGGGCUUGC - 21
• Evidence: experimental ; Illumina [1]

Mature cfa-miR-129-1-3p

• Accession: MIMAT0051732
• Description: Canis lupus familiaris cfa-miR-129-1-3p mature miRNA
• Sequence: 45 - AAGCCCUUACCCCAAAAAGUA - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415