miRBase entry: cfa-mir-502

Stem-loop cfa-mir-502

Accession

MI0008187

Description

Canis familiaris cfa-mir-502 precursor miRNA

Sequence

aauccuugcuaucugggugcuagugcugucucaaugcAAUGCACCUGGGCAAGGAUUCA
(((((((((...((((((((...(((.........)))..)))))))))))))))))..

Structure

--         uau        uag   ugu 
  aauccuugc   cugggugc   ugc   c
  |||||||||   ||||||||   |||   u
  UUAGGAACG   GGUCCACG   Acg   c
AC         ---        -UA   uaa

Annotation confidence Not enough data

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Genome context

chrX: 42785601-42785659 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from cfa-mir-502

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cfa-miR-502

Accession	MIMAT0006761
Description	Canis familiaris cfa-miR-502 mature miRNA
Sequence	38 - AAUGCACCUGGGCAAGGAUUCA - 59
Evidence	experimental Illumina [1]

References

PubMed ID: 18392026
Discovering microRNAs from deep sequencing data using miRDeep
"Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
"Nat Biotechnol (2008) 26:407-415