miRBase entry: cfa-mir-376a-3

Stem-loop cfa-mir-376a-3

Accession

MI0008141

Description

Canis familiaris cfa-mir-376a-3 precursor miRNA

Sequence

gguggauguuccuucuauguuuacgggauuuauaguuaAUCAUAGAGGAAAAUCCACGU
.((((((.(((((.(((((...((..........))....)))))))))).))))))..

Structure

-g      g     u     -uuu  ggga 
  guggau uuccu cuaug    ac    u
  |||||| ||||| |||||    ||     
  CACCUA AAGGA GAUAC    ug    u
UG      A     -     UAau  auau

Annotation confidence Not enough data

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Genome context

chr8: 69269752-69269810 [+]

Clustered miRNAs

15 other miRNAs are < 10 kb from cfa-mir-376a-3

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cfa-miR-376a

Accession	MIMAT0006722
Description	Canis familiaris cfa-miR-376a mature miRNA
Sequence	39 - AUCAUAGAGGAAAAUCCACGU - 59
Evidence	experimental Illumina [1]

References

PubMed ID: 18392026
Discovering microRNAs from deep sequencing data using miRDeep
"Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
"Nat Biotechnol (2008) 26:407-415