miRBase entry: cfa-mir-376a-3

Stem-loop cfa-mir-376a-3


Accession
MI0008141
Description
Canis lupus familiaris cfa-mir-376a-3 precursor miRNA


Sequence

2775 reads, 9.0 reads per million, 63 experiments
gGUGGAUGUUCCUUCUAUGUUUAcgggauuuauaguuaAUCAUAGAGGAAAAUCCACGU
.((((((.(((((.(((((...((..........))....)))))))))).))))))..

Structure
-g      G     U     -UUU  ggga 
  GUGGAU UUCCU CUAUG    Ac    u
  |||||| ||||| |||||    ||     
  CACCUA AAGGA GAUAC    ug    u
UG      A     -     UAau  auau 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
8: 69551462-69551520 [+]
Clustered miRNAs
15 other miRNAs are < 10 kb from cfa-mir-376a-3
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cfa-miR-376a-3-5p

Accession MIMAT0051843
Description Canis lupus familiaris cfa-miR-376a-3-5p mature miRNA
Sequence 2 - GUGGAUGUUCCUUCUAUGUUUA - 23
Evidence experimental
Illumina [1]

Mature cfa-miR-376a-3p

Accession MIMAT0006722
Description Canis lupus familiaris cfa-miR-376a-3p mature miRNA
Sequence 39 - AUCAUAGAGGAAAAUCCACGU - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18392026
    Discovering microRNAs from deep sequencing data using miRDeep
    "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
    "Nat Biotechnol (2008) 26:407-415