miRBase entry: cfa-mir-181b-2

Stem-loop cfa-mir-181b-2

Accession

MI0008153

Description

Canis familiaris cfa-mir-181b-2 precursor miRNA

Sequence

AACAUUCAUUGCUGUCGGUGgguuugagucugaaucaacucacugaucaaugaaugcaaa
..(((((((((..(((((((((((.((.......))))))))))))))))))))))....

Structure

--AA         CU           u  gu 
    CAUUCAUUG  GUCGGUGgguu ga  c
    |||||||||  ||||||||||| ||  u
    guaaguaac  uagucacucaa cu  g
aaac         --           -  aa

Annotation confidence Not enough data

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Genome context

chr9: 58301314-58301373 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cfa-mir-181b-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cfa-miR-181b

Accession	MIMAT0006708
Description	Canis familiaris cfa-miR-181b mature miRNA
Sequence	1 - AACAUUCAUUGCUGUCGGUG - 20
Evidence	experimental Illumina [1]

References

PubMed ID: 18392026
Discovering microRNAs from deep sequencing data using miRDeep
"Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
"Nat Biotechnol (2008) 26:407-415