miRBase entry: cfa-mir-181b-2

Stem-loop cfa-mir-181b-2


Accession
MI0008153
Description
Canis lupus familiaris cfa-mir-181b-2 precursor miRNA


Sequence

932241 reads, 2335.0 reads per million, 78 experiments
AACAUUCAUUGCUGUCGGUGGGUUugagucugaaucaaCUCACUGAUCAAUGAAUGCAAA
..(((((((((..(((((((((((.((.......))))))))))))))))))))))....

Structure
--AA         CU           u  gu 
    CAUUCAUUG  GUCGGUGGGUU ga  c
    |||||||||  ||||||||||| ||  u
    GUAAGUAAC  UAGUCACUCaa cu  g
AAAC         --           -  aa 


Annotation confidence High
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Genome context
9: 59221648-59221707 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cfa-mir-181b-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cfa-miR-181b-2-5p

Accession MIMAT0060786
Description Canis lupus familiaris cfa-miR-181b-2-5p mature miRNA
Sequence 1 - AACAUUCAUUGCUGUCGGUGGGUU - 24
Evidence experimental
Illumina [1]

Mature cfa-miR-181b-2-3p

Accession MIMAT0051828
Description Canis lupus familiaris cfa-miR-181b-2-3p mature miRNA
Sequence 39 - CUCACUGAUCAAUGAAUGCAAA - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18392026
    Discovering microRNAs from deep sequencing data using miRDeep
    "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
    "Nat Biotechnol (2008) 26:407-415