Stem-loop cfa-mir-92b

Accession

MI0008119

Description

Canis lupus familiaris cfa-mir-92b precursor miRNA

Literature search

2 open access papers mention cfa-mir-92b
(2 sentences)

Sequence

2170870 reads, 6376.0 reads per million, 80 experiments

AGGGACGGGACGCGGUGCAGUGUUguucucucccccgccaaUAUUGCACUCGUCCCGGCCUCC
.(((.(((((((.((((((((((((.............))))))))))))))))))).)))..

Structure

-A   A       C            uucuc 
  GGG CGGGACG GGUGCAGUGUUg     u
  ||| ||||||| ||||||||||||     c
  UCC GCCCUGC UCACGUUAUaac     c
CC   G       -            cgccc 

Annotation confidence High

Genome context

7: 42207684-42207746 [-]

Mature cfa-miR-92b-5p

• Accession: MIMAT0051822
• Description: Canis lupus familiaris cfa-miR-92b-5p mature miRNA
• Sequence: 1 - AGGGACGGGACGCGGUGCAGUGUU - 24
• Evidence: experimental ; Illumina [1]

Mature cfa-miR-92b-3p

• Accession: MIMAT0006703
• Description: Canis lupus familiaris cfa-miR-92b-3p mature miRNA
• Sequence: 42 - UAUUGCACUCGUCCCGGCCUCC - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415