Stem-loop cfa-mir-19b-2

Accession

MI0008174

Description

Canis lupus familiaris cfa-mir-19b-2 precursor miRNA

Literature search

1 open access papers mention cfa-mir-19b-2
(1 sentences)

Sequence

324334 reads, 2449.0 reads per million, 82 experiments

guuuugcagguuugcauuucagcguacuugugcauauagggcUGUGCAAAUCCAUGCAAAACUG
((((((((((((((((...((((...(((((....))))))))))))))).)).))))))))..

Structure

--        -  -      uuu    gua     g 
  guuuugca gg uuugca   cagc   cuugu c
  |||||||| || ||||||   ||||   |||||  
  CAAAACGU CC AAACGU   GUcg   ggaua a
GU        A  U      ---    ---     u 

Annotation confidence Not enough data

Genome context

X: 106755718-106755781 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from cfa-mir-19b-2

Mature cfa-miR-19b-3p

• Accession: MIMAT0006652
• Description: Canis lupus familiaris cfa-miR-19b-3p mature miRNA
• Sequence: 43 - UGUGCAAAUCCAUGCAAAACUG - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415