Stem-loop cfa-mir-1842

Accession

MI0008116

Description

Canis familiaris cfa-mir-1842 precursor miRNA

Sequence

UGGCUCUGCGAGGUCAGCUCAaggugggucuggauauugagcaggccugucagggcguug
..((((((..(((((.((((((.((........)).)))))).)))))..))))))....

Structure

--UG      CG     A      g  ggg 
    GCUCUG  AGGUC GCUCAa gu   u
    ||||||  ||||| |||||| ||    
    cgggac  uccgg cgaguu ua   c
guug      ug     a      a  ggu 

Annotation confidence Not enough data

Genome context

chr6: 38759035-38759094 [+]

Mature cfa-miR-1842

• Accession: MIMAT0006701
• Description: Canis familiaris cfa-miR-1842 mature miRNA
• Sequence: 1 - UGGCUCUGCGAGGUCAGCUCA - 21
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415