miRBase entry: cfa-mir-433

Stem-loop cfa-mir-433

Accession

MI0008131

Description

Canis familiaris cfa-mir-433 precursor miRNA

Sequence

uacggugagccugucauuauucagagaggcuagauccucuguguugagaaggAUCAUGAUGGGCUCCUCGGUGU
..(((.(((((((((((.(((((.(((((......))))).))........))).))))))))))).)))....

Structure

--ua   u           u   --------  g     cu 
    cgg gagccugucau auu        ca agagg  a
    ||| ||||||||||| |||        || |||||   
    GCU CUCGGGUAGUA UAg        gu ucucc  g
UGUG   C           C   gaagaguu  g     ua

Annotation confidence Not enough data

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Genome context

chr8: 69103838-69103911 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from cfa-mir-433

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cfa-miR-433

Accession	MIMAT0006712
Description	Canis familiaris cfa-miR-433 mature miRNA
Sequence	53 - AUCAUGAUGGGCUCCUCGGUGU - 74
Evidence	experimental Illumina [1]

References

PubMed ID: 18392026
Discovering microRNAs from deep sequencing data using miRDeep
"Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
"Nat Biotechnol (2008) 26:407-415