Stem-loop cfa-mir-219-1

Accession

MI0008007

Description

Canis familiaris cfa-mir-219-1 precursor miRNA

Gene family

MIPF0000044; mir-219

Sequence

UGAUUGUCCAAACGCAAUUCUcgagucucuggcucuggccgagaguugagucuggacgucccg
.(((.(((((.((.(((((((((.(((.........)))))))))))).)).))))))))...

Structure

--U   U     A  G         a   ucu 
   GAU GUCCA AC CAAUUCUcg guc   g
   ||| ||||| || ||||||||| |||   g
   cug caggu ug guugagagc cgg   c
gcc   -     c  a         -   ucu 

Annotation confidence Not enough data

Genome context

chr12: 2670928-2670990 [+]

Mature cfa-miR-219-5p

• Accession: MIMAT0006611
• Description: Canis familiaris cfa-miR-219-5p mature miRNA
• Sequence: 1 - UGAUUGUCCAAACGCAAUUCU - 21
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415