Stem-loop cfa-mir-371

Accession

MI0007996

Description

Canis familiaris cfa-mir-371 precursor miRNA

Sequence

ACUCAAAAAAUGGCGGCACUUUccuaccuagaacagaaagugcccccacaguuugagugg
(((((((...(((.(((((((((............))))))))).)))...)))))))..

Structure

--       AAA   C         cuacc 
  ACUCAAA   UGG GGCACUUUc     u
  |||||||   ||| |||||||||      
  ugaguuu   acc ccgugaaag     a
gg       gac   c         acaag 

Annotation confidence Not enough data

Comments

This sequence appears to be antisense to the annotated members of the mir-371 family in oter mammals. The orientation of the dog sequence here is supported by 66 miR reads and 2 miR* reads [1].

Genome context

chr1: 103406620-103406679 [+]

Mature cfa-miR-371

• Accession: MIMAT0007747
• Description: Canis familiaris cfa-miR-371 mature miRNA
• Sequence: 1 - ACUCAAAAAAUGGCGGCACUUU - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415