miRBase entry: cfa-mir-380

Accession

MI0008136

Description

Canis familiaris cfa-mir-380 precursor miRNA

Sequence

augguugaccauagaacaugcgcuagcucuaugucgUAUGUAAUAUGGUCCACGUCU
...((.(((((((..(((((((.((......)).)))))))..))))))).))....

Structure

-aug  u       ga       c  gc 
    gu gaccaua  acaugcg ua  u
    || |||||||  ||||||| ||   
    CA CUGGUAU  UGUAUgc gu  c
UCUG  C       AA       u  au

Annotation confidence Not enough data

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Genome context

chr8: 69256764-69256820 [+]

Clustered miRNAs

10 other miRNAs are < 10 kb from cfa-mir-380

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Accession	MIMAT0006717
Description	Canis familiaris cfa-miR-380 mature miRNA
Sequence	37 - UAUGUAAUAUGGUCCACGUCU - 57
Evidence	experimental Illumina [1]

PubMed ID: 18392026
Discovering microRNAs from deep sequencing data using miRDeep
"Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
"Nat Biotechnol (2008) 26:407-415