Stem-loop bta-let-7f-2

Accession

MI0004734

Description

Bos taurus bta-let-7f-2 precursor miRNA

Literature search

59 open access papers mention bta-let-7f-2
(252 sentences)

Sequence

3093239 reads, 14289 reads per million, 77 experiments

ugugggaUGAGGUAGUAGAUUGUAUAGUUuuagggucauaccccaucuuggagauaacuauacagucuacugucuuucccacg
.((((((.((((((((((((((((((((((((((((........))))))))....)))))))))))))))))))))))))).

Structure

u      U                    ----        cau 
 guggga GAGGUAGUAGAUUGUAUAGU    Uuuagggu   a
 |||||| ||||||||||||||||||||    ||||||||    
 cacccu uucugucaucugacauauca    agguucua   c
g      -                    auag        ccc 

Annotation confidence Medium

Genome context

chrX: 97466644-97466726 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-let-7f-2

Mature bta-let-7f

• Accession: MIMAT0003519
• Description: Bos taurus bta-let-7f mature miRNA
• Sequence: 8 - UGAGGUAGUAGAUUGUAUAGUU - 29
• Evidence: experimental ; cloned [1-3]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43


2. PubMed ID: 17306260
   Identification and characterization of microRNAs from the bovine adipose tissue and mammary gland
   "Gu Z, Eleswarapu S, Jiang H"
   "FEBS Lett (2007) 581:981-988


3. PubMed ID: 19267191
   Identification and characteristics of cattle microRNAs by homology searching and small RNA cloning
   "Long JE, Chen HX"
   "Biochem Genet (2009) 47:329-343