miRBase entry: bta-mir-26b

Stem-loop bta-mir-26b


Accession
MI0004745
Description
Bos taurus bta-mir-26b precursor miRNA
Gene family
MIPF0000043; mir-26

Literature search
18 open access papers mention bta-mir-26b
(35 sentences)

Sequence

162340 reads, 1848 reads per million, 77 experiments
ugcccgggacccagUUCAAGUAAUUCAGGAUAGGUUgugugcuguccagccuguucuccauuacuuggcucgggggccggugccc
.((((((..((((((.((((((((..(((((((((((.(......))))))))))))..))))))))))).)))..)))).))..

Structure
-u  -    ga   -   U        UC           u ug 
  gc ccgg  ccc agU CAAGUAAU  AGGAUAGGUUg g  c
  || ||||  ||| ||| ||||||||  ||||||||||| |   
  cg ggcc  ggg ucg guucauua  ucuuguccgac c  u
cc  u    gg   c   -        cc           - ug 


Annotation confidence High
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Genome context
chr2: 107511785-107511869 [+]

Database links

Mature bta-miR-26b

Accession MIMAT0003531
Description Bos taurus bta-miR-26b mature miRNA
Sequence 15 - UUCAAGUAAUUCAGGAUAGGUU - 36
Evidence experimental
cloned [1-2]

References

  1. PubMed ID: 17105755
    Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
    "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
    "Physiol Genomics (2007) 29:35-43

  2. PubMed ID: 19267191
    Identification and characteristics of cattle microRNAs by homology searching and small RNA cloning
    "Long JE, Chen HX"
    "Biochem Genet (2009) 47:329-343