Stem-loop bta-mir-30d

Accession

MI0004747

Description

Bos taurus bta-mir-30d precursor miRNA

Gene family

MIPF0000005; mir-30

Literature search

27 open access papers mention bta-mir-30d
(126 sentences)

Sequence

308004 reads, 5195 reads per million, 78 experiments

guuguUGUAAACAUCCCCGACUGGAAGCUguaccacacagcuaagcuuucagucagauguuugcugcuac
...((.(((((((((...(((((((((((..............))))))))))).))))))))).))...

Structure

guu  U         CCC           guacca 
   gu GUAAACAUC   GACUGGAAGCU      c
   || |||||||||   |||||||||||       
   cg cguuuguag   cugacuuucga      a
cau  u         --a           aucgac 

Annotation confidence High

Genome context

chr14: 8141427-8141496 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-30d

Mature bta-miR-30d

• Accession: MIMAT0003533
• Description: Bos taurus bta-miR-30d mature miRNA
• Sequence: 6 - UGUAAACAUCCCCGACUGGAAGCU - 29
• Evidence: experimental ; cloned [1-2]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43


2. PubMed ID: 17306260
   Identification and characterization of microRNAs from the bovine adipose tissue and mammary gland
   "Gu Z, Eleswarapu S, Jiang H"
   "FEBS Lett (2007) 581:981-988