Stem-loop xtr-mir-200b

Accession

MI0004946

Description

Xenopus tropicalis xtr-mir-200b precursor miRNA

Gene family

MIPF0000019; mir-8

Sequence

cuguggcgcuauugccaucuuacugggcagcauuggauuuugucuauguuucUAAUACUGCCUGGUAAUGAUGAUuauggcgccccaca
.((.((((((((...(((((((((((((((.((((((.............)))))).))))))))))).))))...)))))))).))..

Structure

-c  u        ugc    -           c      uuuug 
  ug ggcgcuau   cauc uuacugggcag auugga     u
  || ||||||||   |||| ||||||||||| ||||||     c
  ac ccgcggua   GUAG AAUGGUCCGUC UAAUcu     u
ac  c        uUA    U           A      uugua 

Annotation confidence Not enough data

Genome context

chr7: 78802277-78802365 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from xtr-mir-200b

Mature xtr-miR-200b

• Accession: MIMAT0003694
• Description: Xenopus tropicalis xtr-miR-200b mature miRNA
• Sequence: 53 - UAAUACUGCCUGGUAAUGAUGAU - 75
• Evidence: not_experimental

References