miRBase entry: bta-mir-181b-2

Stem-loop bta-mir-181b-2


Accession
MI0005013
Description
Bos taurus bta-mir-181b-2 precursor miRNA
Gene family
MIPF0000007; mir-181

Literature search
23 open access papers mention bta-mir-181b-2
(60 sentences)

Sequence

38777 reads, 476 reads per million, 76 experiments
cugauggcugcacucAACAUUCAUUGCUGUCGGUGGGUUugacuuugaaucaacucacugaucaaugaauguaaacugcggaccaaaca
....((((((((....((((((((((..(((((((((((.((.......)))))))))))))))))))))))....))))).)))....

Structure
cuga   -     cucA          CU           u  cu 
    ugg cugca    ACAUUCAUUG  GUCGGUGGGUU ga  u
    ||| |||||    ||||||||||  ||||||||||| ||  u
    acc ggcgu    uguaaguaac  uagucacucaa cu  g
acaa   a     caaa          --           -  aa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr11: 95967281-95967369 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from bta-mir-181b-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-181b

Accession MIMAT0003793
Description Bos taurus bta-miR-181b mature miRNA
Sequence 16 - AACAUUCAUUGCUGUCGGUGGGUU - 39
Evidence experimental
cloned [1,3]

References

  1. PubMed ID: 17105755
    Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
    "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
    "Physiol Genomics (2007) 29:35-43