miRBase entry: bta-mir-92a-2

Stem-loop bta-mir-92a-2


Accession
MI0005024
Description
Bos taurus bta-mir-92a-2 precursor miRNA
Gene family
MIPF0000013; mir-25

Literature search
30 open access papers mention bta-mir-92a-2
(65 sentences)

Sequence

462378 reads, 4598 reads per million, 76 experiments
uggguggggauuuguugcacugcuuguguuauauauaaagUAUUGCACUUGUCCCGGCCUGUggaaga
.((((.(((((..((.(((.(((((((((...)))).))))).)))))..))))).))))........

Structure
-------u    g     uu  u   c     -    u 
        gggu gggau  gu gca ugcuu gugu  
        |||| |||||  || ||| ||||| |||| a
        UCCG CCCUG  CA CGU AUgaa uaua  
agaaggUG    G     UU  -   U     a    u 


Annotation confidence Not enough data
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Genome context
chrX: 18021187-18021254 [-]
Clustered miRNAs
5 other miRNAs are < 10 kb from bta-mir-92a-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-92a

Accession MIMAT0009383
Description Bos taurus bta-miR-92a mature miRNA
Sequence 41 - UAUUGCACUUGUCCCGGCCUGU - 62
Evidence experimental
cloned [2]

References

  1. PubMed ID: 17105755
    Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
    "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
    "Physiol Genomics (2007) 29:35-43