miRBase entry: bta-mir-132

Stem-loop bta-mir-132


Accession
MI0005028
Description
Bos taurus bta-mir-132 precursor miRNA
Gene family
MIPF0000065; mir-132

Literature search
15 open access papers mention bta-mir-132
(50 sentences)

Sequence

3392 reads, 58 reads per million, 67 experiments
ccgcccccgcgucuccagggcaaccguggcuuucgauuguuacugugggaaccggaggUAACAGUCUACAGCCAUGGUCGccccgcagcacgcccacgcgc
.(((....((((((.(.((((.(((((((((...((((((((((.(((...)))..))))))))))...))))))))).)))).).)).))))....))).

Structure
c   cccc    -  c a    a         uuc          -g   g 
 cgc    gcgu cu c gggc accguggcu   gauuguuacu  ugg  
 |||    |||| || | |||| |||||||||   ||||||||||  ||| a
 gcg    cgca ga g cccG UGGUACCGA   CUGACAAUgg  gcc  
c   cacc    c  c c    C         CAU          ag   a 


Annotation confidence High
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Genome context
chr19: 23783488-23783588 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from bta-mir-132
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-132

Accession MIMAT0003812
Description Bos taurus bta-miR-132 mature miRNA
Sequence 59 - UAACAGUCUACAGCCAUGGUCG - 80
Evidence experimental
cloned [1]

References

  1. PubMed ID: 17105755
    Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
    "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
    "Physiol Genomics (2007) 29:35-43