Stem-loop bta-mir-210

Accession

MI0005039

Description

Bos taurus bta-mir-210 precursor miRNA

Literature search

10 open access papers mention bta-mir-210
(20 sentences)

Sequence

6646 reads, 71 reads per million, 71 experiments

ccuccaggcgcagggcagccacugcccaccgcacacugcgcugcuccggacccACUGUGCGUGUGACAGCGGCUGAucugucccugggcagcgcgacc
..((((((.((((..(((((.(((..(((((((((.((.((((...))).).)).)))))).))).))).)))))..)))).))))))..........

Structure

--------cc      c    gg     a   cc   -      c  c -   c 
          uccagg gcag  cagcc cug  cac cgcaca ug g cug  
          |||||| ||||  ||||| |||  ||| |||||| || | ||| u
          gggucc uguc  GUCGG GAC  GUG GCGUGU Ac c ggc  
ccagcgcgac      c    uA     C   -A   U      C  c a   c 

Annotation confidence Medium

Genome context

chr29: 51369011-51369108 [+]

Mature bta-miR-210

• Accession: MIMAT0003824
• Description: Bos taurus bta-miR-210 mature miRNA
• Sequence: 54 - ACUGUGCGUGUGACAGCGGCUGA - 76
• Evidence: experimental ; cloned [1-2]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43


2. PubMed ID: 17306260
   Identification and characterization of microRNAs from the bovine adipose tissue and mammary gland
   "Gu Z, Eleswarapu S, Jiang H"
   "FEBS Lett (2007) 581:981-988