miRBase entry: bta-mir-30a

Stem-loop bta-mir-30a


Accession
MI0005054
Description
Bos taurus bta-mir-30a precursor miRNA
Gene family
MIPF0000005; mir-30

Literature search
32 open access papers mention bta-mir-30a
(164 sentences)

Sequence

575355 reads, 28347 reads per million, 78 experiments
cUGUAAACAUCCUCGACUGGAAGCUgugaggcugcagaaaggcuuucagucggauguuugcagcugc
((((((((((((..(((((((((((...............)))))))))))))))))))))))....

Structure
----            UC           gugagg 
    cUGUAAACAUCC  GACUGGAAGCU      c
    ||||||||||||  |||||||||||      u
    gacguuuguagg  cugacuuucgg      g
cguc            --           aaagac 


Annotation confidence Not enough data
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Genome context
chr9: 10818870-10818936 [-]

Database links

Mature bta-miR-30a-5p

Accession MIMAT0003841
Description Bos taurus bta-miR-30a-5p mature miRNA
Sequence 2 - UGUAAACAUCCUCGACUGGAAGCU - 25
Evidence experimental
cloned [1-2]

References

  1. PubMed ID: 17105755
    Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
    "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
    "Physiol Genomics (2007) 29:35-43

  2. PubMed ID: 19267191
    Identification and characteristics of cattle microRNAs by homology searching and small RNA cloning
    "Long JE, Chen HX"
    "Biochem Genet (2009) 47:329-343