Stem-loop sequence bta-let-7a-1

AccessionMI0005057 (change log)
Previous IDsbta-let-7a
DescriptionBos taurus let-7a-1 stem-loop
Gene family MIPF0000002; let-7
Literature search

63 open access papers mention bta-let-7a-1
(270 sentences)

        u   gu                uuagggucacac 
5' uggga gag  aguagguuguauaguu            c
   ||||| |||  ||||||||||||||||            c
3' auccu uuc  ucaucuaacauaucaa            a
        -   ug                uagagggucacc 
Get sequence
Deep sequencing
7468862 reads, 3.42e+04 reads per million, 78 experiments
Confidence Annotation confidence: high
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Genome context
Coordinates (Btau_5.0.1; GCA_000003205.6) Overlapping transcripts
chr8: 87363854-87363933 [+]
ENSBTAT00000042360 ; bta-let-7a-1-201; exon 1
Clustered miRNAs
< 10kb from bta-let-7a-1
bta-let-7a-1chr8: 87363854-87363933 [+]
bta-let-7f-1chr8: 87364207-87364293 [+]
bta-let-7dchr8: 87366413-87366499 [+]
Database links

Mature sequence bta-let-7a-5p

Accession MIMAT0003844
Previous IDsbta-let-7a

6 - 


 - 27

Get sequence
Deep sequencing22388600 reads, 78 experiments
Evidence experimental; cloned [1]
Predicted targets


PMID:17105755 "Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues" Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP Physiol Genomics. 29:35-43(2007).