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miRBase |
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Stem-loop sequence cel-mir-795 |
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Accession | MI0005196 (change log) | |||||
Description | Caenorhabditis elegans miR-795 stem-loop | |||||
Literature search |
5 open access papers mention cel-mir-795 | |||||
Stem-loop |
-- a c g g gc uac 5' gaaac guu ccug ugaggua auugauca cga uuga c ||||| ||| |||| ||||||| |||||||| ||| |||| 3' uuuug cga ggac gcuucau ugacuagu gcu aacu c uu c u a - aa ugc |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence cel-miR-795-5p |
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Accession | MIMAT0004230 |
Previous IDs | cel-miR-795 |
Sequence |
15 - ugagguagauugaucagcgagcuu - 38 |
Deep sequencing | 109553 reads, 17 experiments |
Evidence | experimental; 454 [1], Illumina [2,4], CLIPseq [3] |
Database links |
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Predicted targets |
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Mature sequence cel-miR-795-3p |
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Accession | MIMAT0020353 |
Previous IDs | cel-miR-795* |
Sequence |
53 - aaucgugaucaguauacuucguc - 75 |
Deep sequencing | 788 reads, 12 experiments |
Evidence | experimental; Illumina [4] |
Database links |
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References |
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1 |
PMID:17174894
"Large-scale sequencing reveals 21U-RNAs and additional microRNAs and endogenous siRNAs in C. elegans"
Cell. 127:1193-1207(2006).
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3 |
PMID:20062054
"Comprehensive discovery of endogenous Argonaute binding sites in Caenorhabditis elegans"
Nat Struct Mol Biol. 17:173-179(2010).
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4 |